Installation

From PyPI

pip install scplotkit

Sankey diagrams need an extra (Plotly + Kaleido for static image export):

pip install "scplotkit[sankey]"

From source

git clone https://github.com/philinscience/scplotkit.git
cd scplotkit
pip install -e ".[dev]"

Requirements

scplotkit requires Python 3.10+ and works with any recent scanpy/anndata installation. It doesn’t require GPU support or any compiled dependencies beyond what scanpy already needs.

Verifying the install

import scplotkit as spk
print(spk.__version__)